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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs35518483 chr22:19532713 TA/T 3.56E-6 470 15.9 16.25 14.33 KM Plot
THCA rs35521186 chr10:82244081 A/T 1.42E-5 473 16.37 15.05 14.93 KM Plot
THCA rs35578589 chr21:37456044 C/T 0.000122 478 16.63 14.33 9.73 KM Plot
THCA rs35579206 chr2:38394118 AG/A 0.000252 486 15.97 15.9 16.38 KM Plot
THCA rs35593316 chr8:8360740 TTGTC/T 1.11E-15 469 16.8 15.33 8.83 KM Plot
THCA rs35606019 chr5:81216383 G/A 0.000262 488 15.9 15 27.82 KM Plot
THCA rs35609970 chr8:8358308 TAGAC/T 1.3E-7 468 16.8 15.25 8.83 KM Plot
THCA rs35620560 chr16:20782373 G/A 4.8E-5 490 16.37 14.67 17.47 KM Plot
THCA rs35687193 chr14:23190040 G/A 1.47E-6 487 15.23 17.13 21.67 KM Plot
THCA rs35719150 chr7:16480952 GCTGA/G 2.02E-10 470 15.13 17.53 18.82 KM Plot
THCA rs35742014 chr7:64291987 G/A 2.82E-11 489 16.37 13 16.87 KM Plot
THCA rs35769342 chr1:119129890 T/A 7.76E-7 489 16.07 15.93 14.57 KM Plot
THCA rs35782682 chr1:184191538 C/A 5.76E-9 477 15.17 19.57 17.77 KM Plot
THCA rs35801481 chr17:57481083 A/G 1.14E-5 481 16.22 15.42 15.17 KM Plot
THCA rs35804525 chr2:85911706 T/C 0.000259 478 15.63 16.8 12.32 KM Plot